Posts Tagged ‘vim editor’

How to deb upgrade PHP 5.3.3-7 / MySQL Server 5.1 to PHP 5.4.37 MySQL 5.5 Server on Debian 6.0 / 7.0 Squeeze / Wheezy GNU / Linux

Thursday, February 12th, 2015

how-to-deb-upgrade-mysql-server-5.1-to-mysql-5.5-php-5.3-to-php-5.4-5.5-upgrade-howto-on-old-stable-debian-squeeze-wheezy

I've been still running Debian Squeeze 6.0 GNU / Linux on few of the Linux / Apache / MySQL servers I'm administrating and those servers are running few Wordperss / Joomla websites which lately face severe MySQL performance issues. I tried to optimize using various mysql performance optimization scripts such as mysql-tuner.pl, Tuning-primer.sh and Percona Toolkit – a collection of advanced command-line tools for system administrators and tech / support staff to perform a variety of MySQL and system tasks that are too difficult or complex to perform manually. Though with above tools and some my.cnf tunizations I managed to achieve positive performance improvement results with above optimizations, still I didn't like how MyQSL served queries and since the SQL server is already about 5 years old (running version 5.1) and the PHP on sever is still at 5.3 branch, I was advised by my dear colleague Anatoliy to try version update as a mean to improve SQLserver performance. I took seriously the suggestion to try upgrade as a mean to resolve performance issues in this article I will explain in short what I had to do to make MySQL upgrade a success

Of course to try keep deb installed software versions as fresh as possible possible deb packagse, I'm already using Debian Back Ports (for those who hear it a first time Debian Backports is a special repository for Stable versioned Debian Desktop and Servers  – supporting stable releases of Debian Linux) which allows you to keep install packages versions less outdated (than default installable software which usually are way behind latest stable package versions with 2-5 years).

If you happen to administer Stable Debian servers and you never used BackPorts I warmly recommend it as it often includes security patches of packages part of Debian stable releases that reached End Of Support (EOS) and already too old even for security updates to be issued by respective Debian Long Term Suport (LTS) repositories.

If you're like me and still in situation to manage remotely Debian 6.0 Squeeze and its the first time you hear about BackPorts and Debian LTShttps://wiki.debian.org/LTS/ to start using those two add to your /etc/apt/sources.list below 3 lines

Open with vim editor and press shift+G to go to last line of file and then press I to enter INSERT mode, once you're done to save, press (ESC) then press : and type x! in short key combination for exit and save setting in vim is 
 

Esc + :x! 

 

debian-server:~# vim /etc/apt/sources.list
deb http://http.debian.net/debian squeeze-lts main contrib non-free
deb-src http://http.debian.net/debian squeeze-lts main contrib non-free
deb http://http.debian.net/debian-backports squeeze-backports main

If you haven't been added a security updates line in /etc/apt/sources.list make sure you add also:

 

deb http://security.debian.org/ squeeze/updates main contrib non-free
deb-src http://security.debian.org/ squeeze/updates main contrib non-free


Then to apply latest security updates and packages from LTS / Backports repository run the usual:

 

debian-server:~# apt-get update && apt-get –yes upgrade
….

If you need to search a package or install something from just added backports repository use:

 

debian-server:~# apt-cache -t squeeze-backports search "mysql-server"
auth2db – Powerful and eye-candy IDS logger, log viewer and alert generator
torrentflux – web based, feature-rich BitTorrent download manager
cacti – Frontend to rrdtool for monitoring systems and services
mysql-server-5.1 – MySQL database server binaries and system database setup
mysql-server-core-5.1 – MySQL database server binaries
mysql-server – MySQL database server (metapackage depending on the latest version)

 

To install specific packages only with all their dependencies from Backports while keeping rest of packages from Debian Stable:

 

debian-server:~# apt-get install -t squeeze-backports "package_name"

In same way you can also search or install specific packages from LTS repo:

 

debian-server:~# apt-get search -t squeeze-lts "package_name"

debian-server:~# apt-get install -t squeeze-lts "package_name"

Latest mysql available from Debian BackPorts and LTS is still quite old 5.1.73-1+deb6u1 therefore I made an extensive research online on how can I easily update MySQL 5.1 to MySQL 5.5 / 5.6 on Debian Stable Linux.
 

Luckily there were already DotDeb deb repositories for Debian LAMP (Linux / Apache  / MySQL / PHP / Nginx ) running servers prepared in order to keep the essential Webserver services up2date even long after distro official support is over. I learned about existence of this repo thanks to a Ryan Tate's post who updates his LAMP stack on TurnKey Linux which by the way is based on slightly modified official stable Debian Linux releases packages

To start using DotDeb repos add in /etc/apt/sources.list (depending whereh you're on Squeeze or Wheeze Debian):

 

deb http://packages.dotdeb.org squeeze all
deb-src http://packages.dotdeb.org squeeze all

or for Debian Wheezy add repos:

 

deb http://packages.dotdeb.org wheezy all
deb-src http://packages.dotdeb.org wheezy all

 

I was updating my DebianLatest MySQL / PHP / Apache release to Latest ones on (6.0.4) Squeeze so added above squeeze repos:

Before refreshing list of package repositories, to authenticate repos issue:

 

debian-server:~# wget -q http://www.dotdeb.org/dotdeb.gpg
debian-server:~# apt-key add dotdeb.gpg

Once again to update my packages from newly added DodDeb repository

 

debian-server:~# apt-get update

Before running the SQL upgrade to insure myself, I dumped all databases with:

 

debian-server:~# mysqldump -u root -p -A > /root/dump.sql

Finally I was brave enough to run apt-get dist-upgrade to update with latest LAMP packages

 

debian-server:~# apt-get dist-upgrade
Reading package lists… Done
Building dependency tree
Reading state information… Done
Calculating upgrade… Done
The following packages will be REMOVED:
  mysql-client-5.1 mysql-server mysql-server-5.1
The following NEW packages will be installed:
  libaio1 libmysqlclient18 mysql-client-5.5 mysql-client-core-5.5 python-chardet python-debian
The following packages will be upgraded:
  curl krb5-multidev libapache2-mod-php5 libc-bin libc-dev-bin libc6 libc6-dev libc6-i386 libcurl3 libcurl3-gnutls libcurl4-openssl-dev libevent-1.4-2
  libgssapi-krb5-2 libgssrpc4 libjasper1 libk5crypto3 libkadm5clnt-mit7 libkadm5srv-mit7 libkdb5-4 libkrb5-3 libkrb5-dev libkrb53 libkrb5support0 libmysqlclient-dev
  libxml2 libxml2-dev locales mysql-client mysql-common ntp ntpdate php-pear php5 php5-cgi php5-cli php5-common php5-curl php5-dev php5-gd php5-imagick php5-mcrypt
  php5-mysql php5-odbc php5-recode php5-sybase php5-xmlrpc php5-xsl python-reportbug reportbug unzip

50 upgraded, 6 newly installed, 3 to remove and 0 not upgraded.
Need to get 51.7 MB of archives.
After this operation, 1,926 kB of additional disk space will be used.
Do you want to continue [Y/n]? Y

As you see from above output above command updates Apache webservers / PHP and PHP related modules, however it doesn't update MySQL installed version, to update also MySQL server 5.1 to MySQL server 5.5

 

debian-server:~#  apt-get install –yes mysql-server mysql-server-5.5

You will be prompted with the usual Debian ncurses text blue interface to set a root password to mysql server, just set it the same as it used to be on old upgraded MySQL 5.1 server.

Well now see whether mysql has properly restarted with ps auxwwf

 

debian-server:~#  ps axuwwf|grep -i sql
root     22971  0.0  0.0 112360   884 pts/11   S+   15:50   0:00  |                   \_ grep -i sql
root     19436  0.0  0.0 115464  1556 pts/1    S    12:53   0:00 /bin/sh /usr/bin/mysqld_safe
mysql    19837  4.0  2.3 728192 194552 pts/1   Sl   12:53   7:12  \_ /usr/sbin/mysqld –basedir=/usr –datadir=/var/lib/mysql –plugin-dir=/usr/lib/mysql/plugin –user=mysql –pid-file=/var/run/mysqld/mysqld.pid –socket=/var/run/mysqld/mysqld.sock –port=3306
root     19838  0.0  0.0 110112   700 pts/1    S    12:53   0:00  \_ logger -t mysqld -p daemon.error

In my case it was running, however if it fails to run try to debug what is going wrong on initialization by manually executing init script /etc/init.d/mysql stop; /etc/init.d/mysql start and look for errors. You can also manually try to run mysqld_safe from console if it is not running run:

 

debian-server:~# /usr/bin/mysqld_safe &

This should give you a good hint on why it is failing to run
 

One more thing left is to check whether php modules load correctly to do so issue:

 

debian-server:~# php -v
Failed loading /usr/lib/php5/20090626/xcache.so:  /usr/lib/php5/20090626/xcache.so: cannot open shared object file: No such file or directory

Failed loading /usr/lib/php5/20090626/xdebug.so:  /usr/lib/php5/20090626/xdebug.so: cannot open shared object file: No such file or directory


You will likely get an exception (error) like above.
To solve the error, reinstall xcache and xcache-debug debs

 

debian-server:~# apt-get purge php5-xcache php5-xdebug

Now PHP + MySQL + Apache environment should be running much smootly.

debian-squeeze-wheeze-update-install-mysql-sevver5.55-620x344-howto

Upgrading the MySQL server / PHP library to MySQL server 5.6 / PHP 5.5 on Wheeze Linux is done in very much analogous ways all you have to do is change the repositories with above wheeze 7.0 ones and to follow the process as described in this article. I haven't tested update on Wheezy yet, so if you happen to try my article with wheezy reports and got a positive upgrade result please drop a comment.

VIM Project (VI Improvied IDE Editor extension to facilitate web development with vi enhanced editor

Wednesday, August 25th, 2010

I use VIM as an editor of choice for many years already.
Yet it’s until recently I use it for a PHP ZF (Zend Framework) web development.

Few days ago I’ve blogged How to configure vimrc for a php syntax highlightning (A Nicely pre-configured vimrc to imrpove the daily text editing experience

This enhancements significantly improves the overall PHP code editing with VIM. However I felt something is yet missing because I didn’t have the power and functunality of a complete IDE like for instance The Eclipse IDE

I was pretty sure that VIM has to have a way to be used in a similar fashion to a fully functional IDE and looked around the net to find for any VIM plugins that will add vim an IDE like coding interface.

I then come accross a vim plugin called VIM Prokject : Organize/Navigate projects of files (like IDE/buffer explorer)

The latest VIM Project as of time of writting is 1.4.1 and I’ve mirrored it here

The installation of the VIM Project VIM extension is pretty straight forward to install it and start using it on your PC issue commands:

1. Install the project VIM add-on

debian:~$ wget http://www.pc-freak.net/files/project-1.4.1.tar.gz
debian:~$ mv project-1.4.1.tar.gz ~/.vim/
debian:~$ cd ~/.vim/
debian:~$ tar -zxvvf project-1.4.1.tar.gz

2. Load the plugin

Launch your vim editor and type : Project(without the space between : and P)
You will further see a screen like:

vim project entry screen

3. You will have to press C within the Project window to load a new project

Then you will have to type a directory to use to load a project sources files from:

vim project enter file source directory screen

You will be prompted with to type a project name like in the screenshot below:

vim project load test project

4. Next you will have to type a CD (Current Dir) parameter
To see more about the CD parameter consult vim project documentation by typing in main vim pane :help project

The appearing screen will be something like:

vim project extension cd parameter screen

5. Thereafter you will have to type a file filter

File filter is necessary and will instruct the vim project plugin to load all files with the specified extension within vim project pane window

You will experience a screen like:

alt=”vim project plugin file filter screen” />

Following will be a short interval in which all specified files by the filter type will get loaded in VIM project pane and your Zend Framework, PHP or any other source files will be listed in a directory tree structure like in the picture shown below:

vim project successful loaded project screen

6. Saving loaded project hierarchy state

In order to save a state of a loaded project within the VIM project window pane you will have to type in vim, let’s say:

:saveas .projects/someproject

Later on to load back the saved project state you will have to type in vim :r .projects/someproject

You will now have almost fully functional development IDE on top of your simple vim text editor.

You can navigate within the Project files loaded with the Project extension pane easily and select a file you would like to open up, whenever a source file is opened and you work on it to switch in between the Project file listing pane and the opened source code file you will have to type twice CTRL+w or in vim language C-w

To even further sophisticate your web development in PHP with vim you can add within your ~/.vimrc file the following two lines:

" run file with PHP CLI (CTRL-M)
:autocmd FileType php noremap <C-M> :w!<CR>:!/usr/bin/php %<CR>
" PHP parser check (CTRL-L)
:autocmd FileType php noremap <C-L> :!/usr/bin/php -l %>CR>

In the above vim configuration directovies the character is a comment line and the autocmd is actually vim declarations.
The first :autocmd … declaration will instruct vim to execute your current opened php source file with the php cli interpreter whenever a key press of CTRL+M (C-m) occurs.

The second :autocmd … will add to your vim a shortcut, so whenever a CTRL+L (C-l) key combination is pressed VIM editor will check your current edited source file for syntax errors.
Therefore this will enable you to very easily periodically check if your file syntax is correct.

Well this things were really helpful to me, so I hope they will be profitable for you as well.
Cheers 🙂